The detailed information of tRNA gene sequence


Sequence ID>SRA1012188
Genome IDSRR020493.208876
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 221
End posion on genome 136
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttagattcaa
tRNA gene sequence 
GGAAAGGTGGCTGAGTGGTCGAAGGCACTCCCCTGCTAAGGGAGCGTATTATATTAGTAC
CAAGGGTTCGAATCCCTTTCTTTCCGtta
Downstream region at tRNA end position 
attggacatg
Secondary structure (Cloverleaf model)
>SRA1012188	Ser	GCT
                   a      Gtta attggacatg
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G + T          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       A A G G G     C
    G         + | |                 T T
    T       A G G C
      C G A        A     CGTATTATATTAGTACC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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