The detailed information of tRNA gene sequence


Sequence ID>SRA1012208
Genome IDSRR020493.216539
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 165
End posion on genome 250
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atccgttatt
tRNA gene sequence 
GGAGGAATGGCAGAGTGGTCGAATGCGGCAGTCTTGAAAACTGTTGAGGGTCACACCTCC
GGGGGTTCGAATCCCTCTTCCTCCGCtt
Downstream region at tRNA end position 
ctaaatacaa
Secondary structure (Cloverleaf model)
>SRA1012208	Ser	TGA
                   t      GCtt ctaaatacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGAGGGTCACACCTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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