The detailed information of tRNA gene sequence


Sequence ID>SRA1012212
Genome IDSRR020493.218007
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 137
End posion on genome 49
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aggtttattc
tRNA gene sequence 
GGAGGGATCGCATAGTCTGGCCTAGTGCGCACGCTTGGAAAGCGTGTAAGGGTTTATCCC
TTCGAGGGTTCGAATCCCTCTCCCTCCGCgt
Downstream region at tRNA end position 
aaaaaaccat
Secondary structure (Cloverleaf model)
>SRA1012212	Ser	GGA
                   c      GCgt aaaaaaccat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        C      | | | | |     G
  T         T A C G       G A G G G     C
  G         + | | |                 T T
  G         G T G C
    C C T A        G     TAAGGGTTTATCCCTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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