The detailed information of tRNA gene sequence


Sequence ID>SRA1012245
Genome IDSRR020493.228915
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 225
End posion on genome 150
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gaccgcttac
tRNA gene sequence 
GTCCCGTTCGTCTAGTGGTTTAGGACACCGCCCTTTCACGGCGGCAACACGGGTTCGAAT
CCCGTACGGGATGCCA
Downstream region at tRNA end position 
tactatttag
Secondary structure (Cloverleaf model)
>SRA1012245	Glu	TTC
                   c      GCCA tactatttag
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T T A        A     CAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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