The detailed information of tRNA gene sequence


Sequence ID>SRA1012248
Genome IDSRR020493.230350
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 283
End posion on genome 199
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ataaaaagca
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTCGAAAGCGAACGACTCGAAATCGTTTAATAGTTAACTATTC
GTGGGTTCGAATCCCACCCTCTCCGttt
Downstream region at tRNA end position 
ttagagttcc
Secondary structure (Cloverleaf model)
>SRA1012248	Ser	CGA
                   a      Gttt ttagagttcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAATAGTTAACTATTC
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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