The detailed information of tRNA gene sequence


Sequence ID>SRA1012282
Genome IDSRR020493.243654
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 233
End posion on genome 144
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttaaatgcC
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGAATGCGGCGGTCTTGAAAACCGTTGAGCCGAAAGGTTCC
GGGGGTTCGAATCCCTCTCTCTCCGACC
Downstream region at tRNA end position 
Aaatatttgg
Secondary structure (Cloverleaf model)
>SRA1012282	Ser	TGA
                   C      GACC Aaatatttgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGAGCCGAAAGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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