The detailed information of tRNA gene sequence


Sequence ID>SRA1012294
Genome IDSRR020493.248455
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 152
End posion on genome 69
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tggattataa
tRNA gene sequence 
GGGAGTATGGCGGAACTGGTAGACGCGCCGGATTCAAAATCCGGTCACTTCGGTGGTGTG
GGTTCGATTCCCTCTACTCTACCAa
Downstream region at tRNA end position 
caaaaattga
Secondary structure (Cloverleaf model)
>SRA1012294	Leu	CAA
                   a      CCAa caaaaattga
                     G   A
                     G + T
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T          T T
                    T     C T C C C     A
      C A A        G      |   | | |     G
    T       G G C G       G T G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TCACTTCGGTGGT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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