The detailed information of tRNA gene sequence


Sequence ID>SRA1012296
Genome IDSRR020493.250224
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 160
End posion on genome 71
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tattcaactc
tRNA gene sequence 
GGAGGAGTGACAGAGCGGTTGAATGTACCGGTCTTGAAAACCGGCGAAGGGGCAACTCTT
CCGTGGGTTCGAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
tatatcagta
Secondary structure (Cloverleaf model)
>SRA1012296	Ser	TGA
                   c      GCCA tatatcagta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C A       G T G G G     C
    G         | | |                 T T
    T       A T G T
      T G A        A     CGAAGGGGCAACTCTTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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