The detailed information of tRNA gene sequence


Sequence ID>SRA1012297
Genome IDSRR020493.250582
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 28
End posion on genome 103
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cattccaaat
tRNA gene sequence 
CGCGGGATAGAGCAGTAGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCTGGTTCGAGT
CCAGCTCCCGCTACTA
Downstream region at tRNA end position 
tgaaaacgga
Secondary structure (Cloverleaf model)
>SRA1012297	Met	CAT
                   t      ACTA tgaaaacgga
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     C G A C C     A
      T G A        A      | | | | |     G
    A       C G A G       G C T G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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