The detailed information of tRNA gene sequence


Sequence ID>SRA1012301
Genome IDSRR020493.252569
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 156
End posion on genome 238
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ctttagatag
tRNA gene sequence 
GCCCGGATGGCGGAATTGGCAGACGCGCTGGACTCAAAATCCAGTATCTTCGGATGTGGG
GGTTCGACTCCCCCTCCGGGTACat
Downstream region at tRNA end position 
ttttaaaaaa
Secondary structure (Cloverleaf model)
>SRA1012301	Leu	CAA
                   g      ACat ttttaaaaaa
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T C
                    T     C C C C C     A
      T A A        G      | | | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TATCTTCGGATGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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