The detailed information of tRNA gene sequence


Sequence ID>SRA1012330
Genome IDSRR020493.270475
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 116
End posion on genome 43
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tacacattac
tRNA gene sequence 
GGGCCTTTAGCTCAGTTGGTTAGAGCACCCGACTCATAATCGGGCGGTCCAGGGTTCAAG
CCCCTGAGGGCCCAttt
Downstream region at tRNA end position 
tgggatatta
Secondary structure (Cloverleaf model)
>SRA1012330	Met	CAT
                   c      Attt tgggatatta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     T - A          C G
                    T     G T C C C     A
      T G A        A      | | | | |     A
    T       C T C G       C A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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