The detailed information of tRNA gene sequence


Sequence ID>SRA1012339
Genome IDSRR020493.276265
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 100
End posion on genome 26
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttggattttT
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGTAGAGCACCTGCATGGCATGCAGGGGGTCAGCGGTTCAAGT
CCGCTTGGCTCCATac
Downstream region at tRNA end position 
taactattat
Secondary structure (Cloverleaf model)
>SRA1012339	Ala	GGC
                   T      ATac taactattat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T G
                    T     T C G C C     A
      C G A        A      | | | | |     A
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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