The detailed information of tRNA gene sequence


Sequence ID>SRA1012351
Genome IDSRR020493.280241
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 170
End posion on genome 83
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaaagactt
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCTGAAAGCGGCACCCTGCTAAGGTGTTAATAGAGTAATCTAT
TCGAGGGTTCGAATCCCTCTCTCTCCGCac
Downstream region at tRNA end position 
tcgtcgacaa
Secondary structure (Cloverleaf model)
>SRA1012351	Ser	GCT
                   t      GCac tcgtcgacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    C       A A G C
      T G A        G     TAATAGAGTAATCTATTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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