The detailed information of tRNA gene sequence


Sequence ID>SRA1012360
Genome IDSRR020493.285410
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 132
End posion on genome 208
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
attcatttca
tRNA gene sequence 
CCGGGTATAGCGCAGTCTGGTAGCGCACTCGCTTTGGGAGCGAGTGGTCGTAGGTTCAAA
TCCTACTACCCCGACCA
Downstream region at tRNA end position 
agcgcctgta
Secondary structure (Cloverleaf model)
>SRA1012360	Pro	TGG
                   a      ACCA agcgcctgta
                     C - G
                     C   C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C A T C C     A
      T G A        A      | | | | |     A
    C       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     TGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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