The detailed information of tRNA gene sequence


Sequence ID>SRA1012398
Genome IDSRR020493.295478
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 176
End posion on genome 101
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
atcatctatT
tRNA gene sequence 
GGGGCTGTAGCTCAGCAGGATAGAGCAACGGTTTCCTAAACCGTAGGCCGTGGGTTCGAC
TCCCGCCAGTCCCGTaa
Downstream region at tRNA end position 
aaataaaaaa
Secondary structure (Cloverleaf model)
>SRA1012398	Arg	CCT
                   T      GTaa aaataaaaaa
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     G - C          T C
                    T     C G C C C     A
      C G A        A      | + | | |     G
    A       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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