The detailed information of tRNA gene sequence


Sequence ID>SRA1012399
Genome IDSRR020493.295853
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 96
End posion on genome 12
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gttccaattt
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTAATGGAGCAGATTGCTAATCTGTCGACGGGAAACCGTCGCC
GGGGTTCGAATCCCCGTCTCTCCGCac
Downstream region at tRNA end position 
aaaacccttn
Secondary structure (Cloverleaf model)
>SRA1012399	Ser	GCT
                   t      GCac aaaacccttn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G C C C C     A
        G A        G      | | | | |     G
      T     G A C C       C G G G G     C
      G       | | |                 T T
      G     A T G G
        T A        A     CGACGGGAAACCGTCGC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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