The detailed information of tRNA gene sequence


Sequence ID>SRA1012403
Genome IDSRR020493.298193
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 187
End posion on genome 114
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aacttgtcgt
tRNA gene sequence 
GGGGCCATAGCTCAGTTGGTAGAGCACCTGCATGGCATGCAGGGGGTCAGGAGTTCGAAT
CTCCTTGGCTCCACtt
Downstream region at tRNA end position 
aatttttctt
Secondary structure (Cloverleaf model)
>SRA1012403	Ala	GGC
                   t      ACtt aatttttctt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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