The detailed information of tRNA gene sequence


Sequence ID>SRA1012406
Genome IDSRR020493.299673
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 178
End posion on genome 105
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcaaatttta
tRNA gene sequence 
GGGATTGTAGTTCAATTGGTTAGAGCACCGCCCTGTCACGGNGGAAGTTGCGAGTTCGAG
TCTCGTCAGTCCCGatt
Downstream region at tRNA end position 
aacaaaaaaa
Secondary structure (Cloverleaf model)
>SRA1012406	Asp	GTC
                   a      Gatt aacaaaaaaa
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G
                     T - A
                     G - C          T G
                    T     T G C T C     A
      T A A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AAGTT
                    C - G
                    C - G
                    G   N
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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