The detailed information of tRNA gene sequence


Sequence ID>SRA1012416
Genome IDSRR020493.303204
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 6
End posion on genome 84
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
nnnnntcaaa
tRNA gene sequence 
CGGGGCGTAGCGCAGTCTGGTTTAGCGCGTCCGTCTGGGGGGCGGGAGGTCGCTGGTTCA
AATCCAGTCGCCCCGACCA
Downstream region at tRNA end position 
aaaaatatga
Secondary structure (Cloverleaf model)
>SRA1012416	Pro	GGG
                   a      ACCA aaaaatatga
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G A C C     A
    C T G A        A      + | | | |     A
  T         C G C G       G C T G G     C
  G         | | | |                 T T
  G         G C G C
    T T T A        G     AGGTC
                    T + G
                    C - G
                    C - G
                    G - C
                    T + G
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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