The detailed information of tRNA gene sequence


Sequence ID>SRA1012492
Genome IDSRR020493.330398
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 107
End posion on genome 179
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
agtgaaaatc
tRNA gene sequence 
GGGTGATTAGCTCAGTTGGTAGAGCGCTTCGTTTACACCGAAGATGTCGGGAGTTCGAGT
CTCTCATCACCCAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1012492	Val	TAC
                   c      Annn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     ATGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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