The detailed information of tRNA gene sequence


Sequence ID>SRA1012502
Genome IDSRR020493.333420
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 16
End posion on genome 106
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagaataatt
tRNA gene sequence 
AGAGAGGTGGCCGAGTGGCTTAAGGCGCACGCTTGGAAAGCGTGTATACGTTAATAGCGT
ATCGAGGGTTCGAATCCCTTCCTCTCTGCAA
Downstream region at tRNA end position 
cttaaaagcc
Secondary structure (Cloverleaf model)
>SRA1012502	Ser	GGA
                   t      GCAA cttaaaagcc
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TATACGTTAATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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