The detailed information of tRNA gene sequence


Sequence ID>SRA1012514
Genome IDSRR020493.336860
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 93
End posion on genome 21
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aggatatttg
tRNA gene sequence 
GGGGCCATAGCTCAGTTGGTAGAGCATCTGCATGGCATGCAGGGGGTCAGCGGTTCAAAT
CCGCTTGGCTCCAtct
Downstream region at tRNA end position 
ttatttgtta
Secondary structure (Cloverleaf model)
>SRA1012514	Ala	GGC
                   g      Atct ttatttgtta
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     T C G C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T + G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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