The detailed information of tRNA gene sequence


Sequence ID>SRA1012533
Genome IDSRR020493.342451
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 82
End posion on genome 157
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aactggttaa
tRNA gene sequence 
TGGGCTGTAGCTCAGTTGGGAGAGCATCTGCTTTGCACGCAGAGGGTCGGAGGTTCAAGT
CCTCTCAGCTCCACCA
Downstream region at tRNA end position 
aatggagaaa
Secondary structure (Cloverleaf model)
>SRA1012533	Ala	TGC
                   a      ACCA aatggagaaa
                     T   C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T C T C C     A
      T G A        A      + | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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