The detailed information of tRNA gene sequence


Sequence ID>SRA1012538
Genome IDSRR020493.344840
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 66
End posion on genome 142
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcaccgcgtt
tRNA gene sequence 
CGGCCTGTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTAGTTCGAG
TCTACCCAGGCCCACCA
Downstream region at tRNA end position 
tgcgatagcc
Secondary structure (Cloverleaf model)
>SRA1012538	Ile	GAT
                   t      ACCA tgcgatagcc
                     C   C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     C C A T C     A
      G G A        A      | | | | |     G
    T       C T C G       G G T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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