The detailed information of tRNA gene sequence


Sequence ID>SRA1012539
Genome IDSRR020493.345826
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 24
End posion on genome 101
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ccacgtaagt
tRNA gene sequence 
GGGTCTGTAGCTCAGCTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGAAGTTCAA
GTCTTCCCAGACCCACCA
Downstream region at tRNA end position 
tcaaatattc
Secondary structure (Cloverleaf model)
>SRA1012539	Ile	GAT
                   t      ACCA tcaaatattc
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T G
                    T     C C T T C     A
    T C G A        A      | | | | |     A
  T         C T C G       G G A A G     C
  G         | | | |                 T T
  G         G A G C
    T T A          G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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