The detailed information of tRNA gene sequence


Sequence ID>SRA1012552
Genome IDSRR020493.350139
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 171
End posion on genome 263
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tgaattcatt
tRNA gene sequence 
GGGAATGATTGAGTAGCTGGTGCTTTCCTCGGTCTTCAAAACCGAAGTCTCGGATTATTT
CGAGAGCTGGGTTCGATTCCCAGGCATTCCCGCat
Downstream region at tRNA end position 
tataaaaaaa
Secondary structure (Cloverleaf model)
>SRA1012552	SeC	TCA
                   t      GCat tataaaaaaa
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G A        T      | | | | |     G
    T       T G A G       C T G G G     C
    G         + | |                 T T
    G       T T T C
      T G C        C     AGTCTCGGATTATTTCGAGAG
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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