The detailed information of tRNA gene sequence


Sequence ID>SRA1012562
Genome IDSRR020493.352119
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 213
End posion on genome 129
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position
ctttaagaag
tRNA gene sequence
GGAGAGGTGGCTGAGTGGTCGAAAGCGAACGACTCGAAATCGTTTAATAGGAAACTATTC
GTGGGTTCGAATCCCACCCTCTCCGttt
Downstream region at tRNA end position
aattatcatt
Secondary structure (Cloverleaf model)
>SRA1012562	Ser	CGA
                   g      Gttt aattatcatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G T G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAATAGGAAACTATTC
                    A - T
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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