The detailed information of tRNA gene sequence


Sequence ID>SRA1012577
Genome IDSRR020493.357826
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 17
End posion on genome 93
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tcgaattgtt
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGGGAGTTCGAA
TCTCTCCGCCCCGACCA
Downstream region at tRNA end position 
ctattgaata
Secondary structure (Cloverleaf model)
>SRA1012577	Pro	TGG
                   t      ACCA ctattgaata
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C T C     A
      C G A        A      | + | | |     G
    C       C G C G       G G G A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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