The detailed information of tRNA gene sequence


Sequence ID>SRA1012594
Genome IDSRR020493.363029
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 135
End posion on genome 59
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggttgtttct
tRNA gene sequence 
GCCAGGGTAGCTCAGTTGGTTAGAGCGAGGGAATCATAACCCCTAGGTCGGCGGTTCGAT
TCCGCCCTCTGGCACCA
Downstream region at tRNA end position 
tttcaaagcc
Secondary structure (Cloverleaf model)
>SRA1012594	Met	CAT
                   t      ACCA tttcaaagcc
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C
                     G + T
                     G - C          T T
                    T     C C G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A - T
                    G - C
                    G - C
                    G - C
                    A   C
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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