The detailed information of tRNA gene sequence


Sequence ID>SRA1012611
Genome IDSRR020493.369347
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 28
End posion on genome 103
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aacaaaatag
tRNA gene sequence 
AGGTGAGTAGTTCAACTGGTAGAGCGCCGGCCTCCAAAGCCGGAAGTTGAGGGTTCGAGT
CCTTCCTCACCTGCAA
Downstream region at tRNA end position 
agaaaattat
Secondary structure (Cloverleaf model)
>SRA1012611	Trp	CCA
                   g      GCAA agaaaattat
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C          T G
                    T     C T T C C     A
      C A A        A      | | + | |     G
    T       C T T G       G A G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          G     AAGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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