The detailed information of tRNA gene sequence


Sequence ID>SRA1012613
Genome IDSRR020493.370213
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 164
End posion on genome 240
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gctcatcttt
tRNA gene sequence 
GGCGGGGTAGCTCAGTTGGTTAGAGCGGAGGAATCATAATCCTTAGGTCGGGGGTTCAAA
TCCCTCTCCCGCTACCA
Downstream region at tRNA end position 
ttaaatttct
Secondary structure (Cloverleaf model)
>SRA1012613	Met	CAT
                   t      ACCA ttaaatttct
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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