The detailed information of tRNA gene sequence


Sequence ID>SRA1012618
Genome IDSRR020493.371679
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 71
End posion on genome 147
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccggaagatg
tRNA gene sequence 
AGTCTGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGAGTTCGAG
TCTCGTCCAGACCGCCA
Downstream region at tRNA end position 
acacaaattt
Secondary structure (Cloverleaf model)
>SRA1012618	Asp	GTC
                   g      GCCA acacaaattt
                     A   C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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