The detailed information of tRNA gene sequence


Sequence ID>SRA1012645
Genome IDSRR020493.380732
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 127
End posion on genome 201
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cgatatgtgc
tRNA gene sequence 
GGGCCCTTCGTCTATCGGTTAGGACGCCAGGTTTTCAACCTGGAAAGAGGGGTTCGATTC
CCCTAGGGCCTGCCA
Downstream region at tRNA end position 
ctgtcgccaa
Secondary structure (Cloverleaf model)
>SRA1012645	Glu	TTC
                   c      GCCA ctgtcgccaa
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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