The detailed information of tRNA gene sequence


Sequence ID>SRA1012657
Genome IDSRR020493.385721
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 231
End posion on genome 155
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
agcttctttc
tRNA gene sequence 
CGGGGAGTAGCGCAGTCTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGCAGGTTCGAA
TCCTGTCTCCCCGACCA
Downstream region at tRNA end position 
ttttaccgaa
Secondary structure (Cloverleaf model)
>SRA1012657	Pro	TGG
                   c      ACCA ttttaccgaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      T G A        A      + | | | |     G
    C       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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