The detailed information of tRNA gene sequence


Sequence ID>SRA1012658
Genome IDSRR020493.386540
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 143
End posion on genome 56
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aacggggaat
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTTAAGGCGCACGCCTGGAAAGCGTGTTGGGGGCAACCCCTC
CAGGGTTCGAATCCCTGTCTCTCCGCAA
Downstream region at tRNA end position 
caatcattca
Secondary structure (Cloverleaf model)
>SRA1012658	Ser	GGA
                   t      GCAA caatcattca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    C       A G G C
      T T A        G     TTGGGGGCAACCCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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