The detailed information of tRNA gene sequence


Sequence ID>SRA1012688
Genome IDSRR020493.396576
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 241
End posion on genome 154
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctggtacttt
tRNA gene sequence 
GGAGAGGTGACCGAGTGGTTTAAGGTGCTCGCCTGGAACGCGAGTGTAGGCTAACGCCTA
CCGTGGGTTCGAATCCCACCTTCTCCGCat
Downstream region at tRNA end position 
tttacttatt
Secondary structure (Cloverleaf model)
>SRA1012688	Ser	GGA
                   t      GCat tttacttatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G T G G G     C
    G         | | |                 T T
    T       A G G T
      T T A        G     TGTAGGCTAACGCCTACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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