The detailed information of tRNA gene sequence


Sequence ID>SRA1012703
Genome IDSRR020493.401275
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 189
End posion on genome 265
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtactccatt
tRNA gene sequence 
CGGGGTGTAGCGCAGCCTGGTAGCGCACTTGGTTTGGGACCAAGGGGCCGTAGGTTCAAA
TCCTACCACCCCGACCA
Downstream region at tRNA end position 
ttatatgaaa
Secondary structure (Cloverleaf model)
>SRA1012703	Pro	TGG
                   t      ACCA ttatatgaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C A T C C     A
      C G A        A      | | | | |     A
    C       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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