The detailed information of tRNA gene sequence


Sequence ID>SRA1012708
Genome IDSRR020493.403041
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 150
End posion on genome 77
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
aacttgtctT
tRNA gene sequence 
GGGGCCATAGCTCAGTGGTAGAGCACCTGCATGGCATGCAGGGGGTCAGGGGTTCAAATC
CCCTTGGCTCCATta
Downstream region at tRNA end position 
aattttatta
Secondary structure (Cloverleaf model)
>SRA1012708	Ala	GGC
                   T      ATta aattttatta
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C C     A
        G A        A      | | | | |     A
      T     C T C G       A G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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