The detailed information of tRNA gene sequence


Sequence ID>SRA1012742
Genome IDSRR020493.412837
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 151
End posion on genome 241
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcgtctctag
tRNA gene sequence 
GTAGAGGTGGCTGAGTGGTTGAAAGCGCTCCCCTGCTAAGGGAGTATGTGGTAATACCGC
ATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gcttttcaga
Secondary structure (Cloverleaf model)
>SRA1012742	Ser	GCT
                   g      GCCA gcttttcaga
                     G - C
                     T   C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        G     TATGTGGTAATACCGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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