The detailed information of tRNA gene sequence


Sequence ID>SRA1012762
Genome IDSRR020493.420484
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 106
End posion on genome 30
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttggaaacgt
tRNA gene sequence 
GGCTACGTAGCTCAGCTGGTTAGAGCGCAGCATTCATAATGCTGAGGTCGGTGGTTCAAG
CCCACCCGTAGCTACCA
Downstream region at tRNA end position 
atgttaatgg
Secondary structure (Cloverleaf model)
>SRA1012762	Met	CAT
                   t      ACCA atgttaatgg
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     G - C          C G
                    T     C C A C C     A
      C G A        A      | | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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