The detailed information of tRNA gene sequence


Sequence ID>SRA1012770
Genome IDSRR020493.424104
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 264
End posion on genome 170
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaatacttaa
tRNA gene sequence 
GGTGAGATGGGTGAGTTGGTTTAAACCATCGGTTTGCTAAACCGACGTACGGTTGAAAAG
CCGTACCGAGGGTTCGAATCCCTCTCTCACCGCCA
Downstream region at tRNA end position 
gaattatctt
Secondary structure (Cloverleaf model)
>SRA1012770	Ser	GCT
                   a      GCCA gaattatctt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G T G G       G A G G G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CGTACGGTTGAAAAGCCGTACC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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