The detailed information of tRNA gene sequence


Sequence ID>SRA1012783
Genome IDSRR020493.428253
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 181
End posion on genome 93
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttttaatttt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGCTGAAGGCGCACGCTTGGAAAGCGTGTTTACGTTTGTAGCGT
AACGTGGGTTCGAATCCCACTCTCTCCGCat
Downstream region at tRNA end position 
tgttcatctt
Secondary structure (Cloverleaf model)
>SRA1012783	Ser	GGA
                   t      GCat tgttcatctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TTTACGTTTGTAGCGTAAC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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