The detailed information of tRNA gene sequence


Sequence ID>SRA1012787
Genome IDSRR020493.430090
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 211
End posion on genome 136
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gtagaaaagg
tRNA gene sequence 
GCTGGTGTAGTTCAATCGGTAGAACAACTGATTTGTAATCAGTAGGTTGAGAGTTCGAGT
CCCTCCACCAGCACCA
Downstream region at tRNA end position 
tttttatatt
Secondary structure (Cloverleaf model)
>SRA1012787	Thr	TGT
                   g      ACCA tttttatatt
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | | |   |     G
    C       C T T G       G A G A G     C
    G       | | | |                 T T
    G       G A A C
      T A          A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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