The detailed information of tRNA gene sequence


Sequence ID>SRA1012809
Genome IDSRR020493.439265
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 118
End posion on genome 193
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
taattgtatt
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGCAGAGCACGTGCATGGCATGCACGGGGTCAGGGGTTCAAAT
CCCCTCAGCTCCACAA
Downstream region at tRNA end position 
acaaatatga
Secondary structure (Cloverleaf model)
>SRA1012809	Ala	GGC
                   t      ACAA acaaatatga
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTC
                    C - G
                    G - C
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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