The detailed information of tRNA gene sequence


Sequence ID>SRA1012815
Genome IDSRR020493.440366
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 145
End posion on genome 229
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ttattttaat
tRNA gene sequence 
GGGGATGTGGTGGAATTGGTAGACACGTGCGACTCAAACTCGCATGCTGAAAAGCGTAAC
GGTTCAAGTCCGTTCATCCCTACCA
Downstream region at tRNA end position 
cttgatataa
Secondary structure (Cloverleaf model)
>SRA1012815	Leu	CAA
                   t      ACCA cttgatataa
                     G + T
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T T G C C     A
      T A A        G      | | | | |     A
    T       G G T G       A A C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGCTGAAAAGCGT
                    T - A
                    G - C
                    C - G
                    G - C
                    A - T
                  C       C
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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