The detailed information of tRNA gene sequence


Sequence ID>SRA1012821
Genome IDSRR020493.441468
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 7
End posion on genome 82
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
nnnncacgag
tRNA gene sequence 
GGGCGCTTAGCTCAGTTGGAAGAGCGTCTGGTTTGCAACCAGAAGGCCGGGGGTTCAAAT
CCCCCAGCGTCCACCA
Downstream region at tRNA end position 
tcaccctcta
Secondary structure (Cloverleaf model)
>SRA1012821	Ala	TGC
                   g      ACCA tcaccctcta
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     C - G
                     T - A          T A
                    T     C C C C C     A
      T G A        A      | | | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     AGGCC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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