The detailed information of tRNA gene sequence


Sequence ID>SRA1012844
Genome IDSRR020493.452594
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 235
End posion on genome 145
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atgaacatta
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCACGCTTGGAAAGCGTGTAAACGGGAAACTGTT
TCGAGGGTTCGAATCCCTCTCTCTCCGACC
Downstream region at tRNA end position 
Aatttttaat
Secondary structure (Cloverleaf model)
>SRA1012844	Ser	GGA
                   a      GACC Aatttttaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TAAACGGGAAACTGTTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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