The detailed information of tRNA gene sequence


Sequence ID>SRA1012870
Genome IDSRR020493.462894
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 230
End posion on genome 141
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taaaaaactc
tRNA gene sequence 
GGAGAGTTGGCTGAGTGGTCGAAAGCGCCTCCCTGCTAAGGAGGTATACGGGTAACTGTA
TCGAGGGTTCGAATCCCTCACTCTCCGCCA
Downstream region at tRNA end position 
ttttggagaa
Secondary structure (Cloverleaf model)
>SRA1012870	Ser	GCT
                   c      GCCA ttttggagaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TATACGGGTAACTGTATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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