The detailed information of tRNA gene sequence


Sequence ID>SRA1012877
Genome IDSRR020493.465139
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 203
End posion on genome 112
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctggaaatat
tRNA gene sequence 
GGAAGAGTGGGTGAGCGGTTGAAACCAGTTGGTTGCTAACTAACCGTACGAGTAACATCG
TACCGAGAGTTCGAATCTCTCCTCTTCCGCCA
Downstream region at tRNA end position 
gttatttaaa
Secondary structure (Cloverleaf model)
>SRA1012877	Ser	GCT
                   t      GCCA gttatttaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C T C T C     A
      C G A        G      | | | | |     G
    G       G T G G       G A G A G     C
    G         | | |                 T T
    T       A A C C
      T G A        A     CGTACGAGTAACATCGTACC
                    G - C
                    T - A
                    T - A
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK