The detailed information of tRNA gene sequence


Sequence ID>SRA1012891
Genome IDSRR020493.473332
Search identical group
Phylum/ClassMicrobial community gene content and expression in the Central North Pacific Gyre, Station ALOHA, HOT186 (SRP001041)
Species
Start position on genome 158
End posion on genome 83
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nnnncctttt
tRNA gene sequence 
GGCGGAGTAGCTCAGTTGGTTAGAGCGGTGGAATCATAATCCATGTGTCGGGGTTCAAAT
CCCTCCTCCGCTACCA
Downstream region at tRNA end position 
agaataatca
Secondary structure (Cloverleaf model)
>SRA1012891	Met	CAT
                   t      ACCA agaataatca
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A        + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     GTGT
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK